Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901464.1_cds_XP_016451494.1_45838
CDS Infomation

[gene=LOC107776157] [db_xref=GeneID:107776157] [protein=probable thimet oligopeptidase] [protein_id=XP_016451494.1] [location=join(676..747,1243..1344,1646..1738,2067..2147,2248..2410,2511..2631,2725..2794,2867..2974,8094..8191,8274..8319,8729..8825,15851..15924,15998..16102,16573..16653,17487..17594)] [gbkey=CDS]
Sequence

ATGGGGAGATTGCCGGTTTTTACTGCGAGAAGGGGCAAACTTTTGGCGTTTTTGTGTTTC
GTTCGTGGCTGGTATAGAAATTCTCTGTCTTTGAAGGTGGGATCAACCAGAAGAGCTGTT
TCTATTTCCTATGGGCGCAGATGTGAAGCCAATGTTACTATCCTTGAAAAGCTGATTCAG
TTGCGGCACAAGCTTGCTAGATTGCTTGGCTTTGCAAATTATGCTGACTATGCCACTGAT
GTTAGAATGGCAAAGTCTTCCTCTAAGGTGTTTGAGTTCTTGGAGAGTCTCTCTGCTAGC
TTAAATGATTTAGCCTACAGGGAACTTTCGATGGTTAAAGCATTAAAGAAGAAAGAGGAA
GGCGAATGTCCTTTCGGCATGGAGGATCTTCCATACTACGTCAAAAGAGTCAAAGATCAA
CAATTCCATATGAATTTTGGAGTAATTAAACAGTACTTCCCTATCAATTTGGTTTTGTCC
GGCATCTTCAAAATCTGCCAAGACTTATTTGGCTTAGATTTCAAGGAAGTTGAAGGTGCT
GAGGTTTGGCATCCAGATGTGCAGCTATTTTCAACTTCAGATCTAAGTTCTAAAGGACTT
GTTGGTTATTTTTACCTAGATCTATACTCCAGAGTCGGTAAATATGCGCACACCTGTGTC
GTAGCTCTTCAGAATGGTTTACTAAATAATGGTTCAAGACAGATTCCTGTGGCACTACTT
GTTTCTCAATTTGAAAAGAAAGTTGATGGTCACCCTGGGTTGTTGCAATTCCCTGAAGTG
GTGAATCTTTTCCATGAATTTGGTCATGTGATACATCACATTTGCAACTGTGCATCATTT
GCCAAATTCTCGGGGCTGCGCCTGGATCCTGATTTTGTGGAGATTCCTGCCCTTTTGATG
GAGAATTGGTGCTATGAAAGCCTCTCTTTGAGGCTGATCTCTGGTTTTCATCAGGATATC
ACAAAGCCCATCAAAGATGAACTTTGTAAATCGCTTAAGAAATGGCGATGCTCCTTCTCA
GCACTGAAATTAAAACAGGAGATCTTTTATTGTCTATTCGATCAAATTATTCATTCTACT
GAGAATGTTGACATTAGTGGGCTGTTCAAGCATCTTTATCCGAAGGTTATGGTAGGCTTA
CCGCTTTTAGAAGGAATTAACCCAGCTTCATGTTTTCCACGAACTGCTATTGGCTATGAG
GCCACTTGCTACAGTCACATCTGGAGTGAGGTCTTTGCTGCTGATATATTTGCGTTGAAG
TTTCATGATGATATTTTCAACCTGCAAGCAGGCTTGCAATTTAGGAATAAGGTATTGGCC
CCAGGAGGAGGAAAAGACCCCATTGAAATGTTATCTGAATTTCTTGGGAGGGACCCATCA
ATACAAGCTTTTCTTGACAGCATATCTGGTACAAACTAG

Peptide Sequence

PEP ID

XP_016451494.1
PEP Infomation

PREDICTED: probable thimet oligopeptidase [Nicotiana tabacum]
Sequence

MGRLPVFTARRGKLLAFLCFVRGWYRNSLSLKVGSTRRAVSISYGRRCEANVTILEKLIQ
LRHKLARLLGFANYADYATDVRMAKSSSKVFEFLESLSASLNDLAYRELSMVKALKKKEE
GECPFGMEDLPYYVKRVKDQQFHMNFGVIKQYFPINLVLSGIFKICQDLFGLDFKEVEGA
EVWHPDVQLFSTSDLSSKGLVGYFYLDLYSRVGKYAHTCVVALQNGLLNNGSRQIPVALL
VSQFEKKVDGHPGLLQFPEVVNLFHEFGHVIHHICNCASFAKFSGLRLDPDFVEIPALLM
ENWCYESLSLRLISGFHQDITKPIKDELCKSLKKWRCSFSALKLKQEIFYCLFDQIIHST
ENVDISGLFKHLYPKVMVGLPLLEGINPASCFPRTAIGYEATCYSHIWSEVFAADIFALK
FHDDIFNLQAGLQFRNKVLAPGGGKDPIEMLSEFLGRDPSIQAFLDSISGTN

Transcript Sequence

Gene sequence data has not been registered.